Difference between revisions of "Links"
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* [http://obofoundry.org/cgi-bin/detail.cgi?caro Common Anatomy Reference Ontology (CARO)] ([http://purl.org/obo/owl/CARO also available in OWL format]) | * [http://obofoundry.org/cgi-bin/detail.cgi?caro Common Anatomy Reference Ontology (CARO)] ([http://purl.org/obo/owl/CARO also available in OWL format]) | ||
* [http://www.fruitfly.org/~cjm/obd/formats.html OBD Phenotype file formats] - Includes standards and schemas for PhenoSyntax and PhenoXML | * [http://www.fruitfly.org/~cjm/obd/formats.html OBD Phenotype file formats] - Includes standards and schemas for PhenoSyntax and PhenoXML | ||
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| + | '''Data typed using phenotype ontology''' | ||
| + | * [http://www.phenotypeontology.org/phenotype_annotation/ OBD data and schema downloads] | ||
===Fish resources=== | ===Fish resources=== | ||
Revision as of 01:18, 19 May 2007
Contents
Links relevant to the project
Ontologies
National Center for Biomedical Ontology
- Ontologies from NCBO
- Common Anatomy Reference Ontology (CARO) (also available in OWL format)
- OBD Phenotype file formats - Includes standards and schemas for PhenoSyntax and PhenoXML
Data typed using phenotype ontology
Fish resources
Morphology image database resources
Software
Bibliography
We also maintain a list of references on Connotea, using the tag "phenomap". This list may be more up-to-date than the bibliography below.
Anyone can easily recommend references (and in fact any site or resource) to us simply by tagging it with "phenomap" in Connotea.
Reprints
- Mabee PM et al (2007). Phenotype ontologies: the bridge between genomics and evolution. Trends Ecol Evol mabee2007
- Schulz et al (2007). Spatial location and its relevance for terminological inferences in bio-ontologies. BMC Bioinformatics 2007, 8:134 doi:10.1186/1471-2105-8-134
References
<biblio>
- mabee2007 pmid=17416439
</biblio>
