Sample Configuration 1

The Phenote window for sample.cfg

This interface is created with the configuration file sample.cfg shown below:

The configuration file: sample.cfg

<?xml version="1.0" encoding="UTF-8"?>
<ns:phenote-configuration version="1.3-beta1" xmlns:ns="phenote/config/xml">
  <ns:log config-file="conf/log4j-standalone.xml"/>
  <ns:dataadapter name="phenote.dataadapter.delimited.DelimitedFileAdapter" enable="true"/>

  <ns:uvic-graph enable="false"/>
  <ns:term-history enable="false"/>   
  <ns:auto-update-ontologies enable="false"/>  <
  <ns:update-timer timer="15"/>< 
  <ns:field name="Example Free-text" syntax-abbrev="PUB" enable="true"/> 
  <ns:field name="Genotype" syntax-abbrev="GT" enable="false"/>
  <ns:field name="Example Multi-Ontology" syntax-abbrev="E" enable="true">   
    <ns:ontology name="Relationship" file="relationship.obo" repos-subdir="OBO_REL" is-postcomp-rel="true"/>   
    <ns:ontology name="GO" file="gene_ontology.obo" repos-subdir="genomic-proteomic"/>   
    <ns:ontology name="CL" file="cell.obo" repos-subdir="anatomy/cell_type"/> 
  </ns:field>
  <ns:field name="Example Single-Ontology" syntax-abbrev="Q" enable="true">   
    <ns:ontology name="PATO" file="quality.obo" repos-subdir="phenotype"/> 
  </ns:field>
  <ns:field name="Description" syntax-abbrev="Desc" enable="true"/>
</ns:phenote-configuration>