Difference between revisions of "2009 Grant Renewal Workshop"
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''Note that this agenda is still in draft stage and may change before the meeting.'' | ''Note that this agenda is still in draft stage and may change before the meeting.'' | ||
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| + | === Agenda items === | ||
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| + | * Connecting multi-species ontologies | ||
| + | * Homology relationship | ||
| + | * Homology annotations and mappings | ||
| + | * Mapping phenotype changes onto phylogenetic trees | ||
=== Tuesday, Apr. 27, 2009 === | === Tuesday, Apr. 27, 2009 === | ||
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'''Afternoon:''' | '''Afternoon:''' | ||
| − | * 1:30: | + | * 1:30: EQ support by all involved model organism databases |
* 3:15 Coffee break | * 3:15 Coffee break | ||
| + | * 3.30 Ontology building | ||
* 5:00: Van back to hotel | * 5:00: Van back to hotel | ||
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=== Wednesday, Apr. 28, 2009 === | === Wednesday, Apr. 28, 2009 === | ||
Revision as of 17:38, 28 April 2009
A workshop hosted by the National Evolutionary Synthesis Center (NESCent)
Location and Date
Venue: National Evolutionary Synthesis Center (NESCent) (directions, also see information for visitors)
Date: April 28-29, 2009
Organizers: Paula Mabee, Monte Westerfield, Todd Vision
Introduction
The goal of this workshop is to discuss plans for a renewal of the Phenoscape NSF grant, to be submitted in July 2009. Specific aims of the renewal are to be determined by the workshop participants. An initial list includes creating the informatics tools necessary to integrate and mediate between different concepts of homology, extending the systematics legacy data transformation to all vertebrates, and laboratory case-studies for following up specific hypotheses generated by the expanding knowledge base.
Agenda
Note that this agenda is still in draft stage and may change before the meeting.
Agenda items
- Connecting multi-species ontologies
- Homology relationship
- Homology annotations and mappings
- Mapping phenotype changes onto phylogenetic trees
Tuesday, Apr. 27, 2009
Afternoon:
- 1:30: EQ support by all involved model organism databases
- 3:15 Coffee break
- 3.30 Ontology building
- 5:00: Van back to hotel
Wednesday, Apr. 28, 2009
Morning:
- 8:00 SHUTTLE FROM HOTEL
- 8:15 Coffee & pastries
- 10:45 COFFEE
- 12:15 LUNCH
Afternoon:
- 1:30:
- 3:15 Coffee break
- 5:00: Van back to hotel
- 6:30 Van from hotel to dinner (whole group)
Logistics
- For long-distance participants, the hotel is the Millennium Hotel (2800 Campus Walk Ave, Durham, NC 27705; tel. (919) 383-8575)
- For dining & entertainment, NESCent is right across from Ninth Street
- For the venue, NESCent is in the historic Erwin Mills building (directions)
Reading
- Within the Phenoscape project, we have been tagging interesting references about phenotype and taxonomy ontologies by using the tag "phenoscape" on Connotea. Everyone is welcome to suggest references by using this tag.
Participants
Members of Phenoscape are in bold font.
| Name | Institution |
|---|---|
| Judy Blake | The Jackson Laboratory |
| Wasila Dahdul | Phenoscape, and Department of Biology, University of South Dakota |
| Hilmar Lapp | Phenoscape, and NESCent |
| Suzi Lewis | Berkeley Bioinformatics and Ontology Project |
| John Lundberg | Phenoscape, and Department of Ichthyology, Academy of Natural Sciences |
| Paula Mabee | Phenoscape, and Department of Biology, University of South Dakota |
| Anne Maglia | Missouri University of Science and Technology |
| Peter Midford | Dept. of Ecology and Evolutionary Biology, University of Kansas |
| Paul Sereno | University of Chicago |
| Todd Vision | Phenoscape, NESCent, and Department of Biology, University of North Carolina at Chapel Hill |
| Peter Vize | Department of Biology, University of Calgary |
| Monte Westerfield | Phenoscape, Zebrafish Information Network (ZFIN) and Institute of Neuroscience, University of Oregon |
