Difference between revisions of "Configuring Mesquite with the NeXML plugin"

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*Download the NeXML Mesquite plugin: [https://www.dropbox.com/sh/yp8t4jvb5id879m/S7ERRMkUpw https://www.dropbox.com/sh/yp8t4jvb5id879m/S7ERRMkUpw].  The downloaded folder is called nexml_mesquite_plugin.
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{{StatusBox|''Note that the documentation for Phenex is now at Github, see https://github.com/phenoscape/Phenex/wiki''}}
  
*Within the nexml_mesquite_plugin folder, there are two subfolders ("mesquite" and "org"). The contents of these two folders should be copied into the corresponding "mesquite" and "org" folders in the Mesquite application directory. Note that you need to copy the *contents* of the plugin's "mesquite" and "org" folders to the application folder's "mesquite" and "org" folders, as shown below.
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* Download the NeXML Mesquite plugin: https://github.com/nexml/nexml.java/releases/tag/mesquite-nexml-v0.1.  The downloaded folder is called NeXML-Mesquite-Plugin.zip.
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* Expand the downloaded archive. Within the NeXML-Mesquite-Plugin folder, there are two subfolders ("mesquite" and "org"). The contents of these two folders should be copied into the corresponding "mesquite" and "org" folders in the Mesquite application directory. Note that you need to copy the *contents* of the plugin's "mesquite" and "org" folders to the application folder's "mesquite" and "org" folders, as shown below.
 
http://phenoscape.org/wg/phenoscape/images/2/2e/Nexml_plugin.png
 
http://phenoscape.org/wg/phenoscape/images/2/2e/Nexml_plugin.png
  
 
* You can now start up Mesquite, open a NEXUS file, and export the file (File > Export) in NeXML format.
 
* You can now start up Mesquite, open a NEXUS file, and export the file (File > Export) in NeXML format.

Latest revision as of 22:42, 12 December 2017

Status: Note that the documentation for Phenex is now at Github, see https://github.com/phenoscape/Phenex/wiki
  • Expand the downloaded archive. Within the NeXML-Mesquite-Plugin folder, there are two subfolders ("mesquite" and "org"). The contents of these two folders should be copied into the corresponding "mesquite" and "org" folders in the Mesquite application directory. Note that you need to copy the *contents* of the plugin's "mesquite" and "org" folders to the application folder's "mesquite" and "org" folders, as shown below.

Nexml_plugin.png

  • You can now start up Mesquite, open a NEXUS file, and export the file (File > Export) in NeXML format.