Difference between revisions of "Database Roadmap"
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==Cartik== | ==Cartik== | ||
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| + | <sup>*</sup> indicates task dependency | ||
* Work on moving database connection parameters from code to properties file that does not go into SVN. '''[Done]''' | * Work on moving database connection parameters from code to properties file that does not go into SVN. '''[Done]''' | ||
* Document inherited database query module in OBD API* '''[In Progress]''' | * Document inherited database query module in OBD API* '''[In Progress]''' | ||
* Finish documentation of the OBD reasoner on the Wiki '''[First iteration done]''' | * Finish documentation of the OBD reasoner on the Wiki '''[First iteration done]''' | ||
| + | * Investigate implementation of Unit test modules for database queries* [Partially done] | ||
| + | * Work on Unit test modules for database queries* [Partially done] | ||
| + | * Document performance metrics of database queries from Unit test cases* '''[In Progress]''' | ||
| + | * Document query optimization patterns for database queries* '''[In Progress]''' | ||
| − | === | + | ===February=== |
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* Complete documentation of query execution methods* | * Complete documentation of query execution methods* | ||
| − | * | + | * Implement improved query methods to speed up execution of anatomy and gene data services |
** NOTE: contingent upon completion of previous related tasks marked with * | ** NOTE: contingent upon completion of previous related tasks marked with * | ||
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* Investigate possible additions to OBD reasoner (with input from Hilmar and Jim) to infer presence/absence of anatomical features | * Investigate possible additions to OBD reasoner (with input from Hilmar and Jim) to infer presence/absence of anatomical features | ||
| − | * | + | * Implement augmentations to reasoner to infer presence/absence of anatomical features |
| + | * Add extinct/extant species information to the database | ||
| − | === | + | ===March=== |
| − | * | + | * Add collection information to the database |
| − | + | * Add publication information to database | |
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| − | * | ||
** NOTE: Dependant upon SICI and Endnote work | ** NOTE: Dependant upon SICI and Endnote work | ||
| − | + | * Add Taxon query service to Phenoscape | |
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| − | * | ||
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* Bug fixes | * Bug fixes | ||
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* Status check | * Status check | ||
==Jim== | ==Jim== | ||
Revision as of 00:12, 22 January 2009
This is a development roadmap for the second production iteration of the Phenoscape database and web interface, intended for demonstration and testing at the ASIH 2009 meeting.
Contents
Cartik
January 2009
* indicates task dependency
- Work on moving database connection parameters from code to properties file that does not go into SVN. [Done]
- Document inherited database query module in OBD API* [In Progress]
- Finish documentation of the OBD reasoner on the Wiki [First iteration done]
- Investigate implementation of Unit test modules for database queries* [Partially done]
- Work on Unit test modules for database queries* [Partially done]
- Document performance metrics of database queries from Unit test cases* [In Progress]
- Document query optimization patterns for database queries* [In Progress]
February
- Complete documentation of query execution methods*
- Implement improved query methods to speed up execution of anatomy and gene data services
- NOTE: contingent upon completion of previous related tasks marked with *
- Investigate possible additions to OBD reasoner (with input from Hilmar and Jim) to infer presence/absence of anatomical features
- Implement augmentations to reasoner to infer presence/absence of anatomical features
- Add extinct/extant species information to the database
March
- Add collection information to the database
- Add publication information to database
- NOTE: Dependant upon SICI and Endnote work
- Add Taxon query service to Phenoscape
- Bug fixes
- Status check
