Difference between revisions of "KB data integrity checks"

From phenoscape
Line 1: Line 1:
 
This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase.
 
This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase.
 +
 +
= Data =
 +
 +
Wherever the integrity checks are formulated as a query (SPARQL wherever possible), they use the data as represented in the following version: [http://phenoscape.svn.sourceforge.net/viewvc/phenoscape/tags/data-2011-11-17/rdf%2Bowl/ November 17, 2011]
 +
 +
= Integrity checks =
  
 
==Obsolete terms used in phenotype annotations==
 
==Obsolete terms used in phenotype annotations==

Revision as of 21:39, 17 November 2011

This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase.

Data

Wherever the integrity checks are formulated as a query (SPARQL wherever possible), they use the data as represented in the following version: November 17, 2011

Integrity checks

Obsolete terms used in phenotype annotations

Check that there is no multiple inheritance within TTO

Relational qualities should have related entity

Non-relational qualities should not have related entity