Difference between revisions of "KB data integrity checks"
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Jim Balhoff (talk | contribs) (Created page with "This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase. Category:Informatics [[Category:Curatio...") |
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This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase. | This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase. | ||
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| + | = Data = | ||
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| + | Wherever the integrity checks are formulated as a query (SPARQL wherever possible), they use the RDF/OWL representation of the data in the following version: [http://phenoscape.svn.sourceforge.net/viewvc/phenoscape/tags/data-2011-11-17/rdf%2Bowl/ November 17, 2011] | ||
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| + | The most current version of the RDF/OWL is also in svn: http://phenoscape.svn.sourceforge.net/viewvc/phenoscape/trunk/data/rdf%2Bowl/ | ||
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| + | = Integrity checks = | ||
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| + | ==Obsolete terms used in phenotype annotations== | ||
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| + | ==Check that there is no multiple inheritance within TTO== | ||
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| + | ==Relational qualities should have related entity== | ||
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| + | ==Non-relational qualities should not have related entity== | ||
[[Category:Informatics]] | [[Category:Informatics]] | ||
[[Category:Curation]] | [[Category:Curation]] | ||
[[Category:Reasoning]] | [[Category:Reasoning]] | ||
Latest revision as of 21:41, 17 November 2011
This page documents data integrity checks that would be useful to implement in a testing framework running against the Knowledgebase.
Contents
Data
Wherever the integrity checks are formulated as a query (SPARQL wherever possible), they use the RDF/OWL representation of the data in the following version: November 17, 2011
The most current version of the RDF/OWL is also in svn: http://phenoscape.svn.sourceforge.net/viewvc/phenoscape/trunk/data/rdf%2Bowl/
