Difference between revisions of "Map Qualities on Tree"

From phenoscape
(Map Qualities on Tree)
(Map Qualities on Tree)
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==== Access from Entity Page via tree button ====
 
==== Access from Entity Page via tree button ====
  
[[Image:EntityPanelButtons.png]]
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[[Image:MapQualities1.png]]
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 +
[[Image:MapQualities2.png]]
  
 
==== Taxonomic Scope ====
 
==== Taxonomic Scope ====

Revision as of 23:25, 20 January 2010

Map Qualities on Tree

Version 2

Access from Entity Page via tree button

Error creating thumbnail: Unable to save thumbnail to destination
Error creating thumbnail: Unable to save thumbnail to destination

Taxonomic Scope

Display qualities using a grid of colored tiles

  • Qualities are displayed with consistent location and color in the grid
  • Desaturated colors are used for qualities of phenotypes that are inferred, rather than annotated
    • Note annotation to Ictaluridae in this and next candidate example
  • The 16 tile designs are intended to support expansion of the list of qualities used in curation - as has already happened.
Error creating thumbnail: Unable to save thumbnail to destination

Display qualities using colored icons strung along branches

  • Qualities are displayed with consistent icon, color and relative position along branches
  • As above, desaturated colors are used for inferred qualities
  • Additional icons may be added
Error creating thumbnail: Unable to save thumbnail to destination


Version 1

Display qualities using a grid of colored tiles

  • Qualities are displayed with consistent location and color in the grid
  • Desaturated colors are used for qualities of phenotypes that are inferred, rather than annotated
    • Note annotation to Ictaluridae in this and next candidate example
  • The 16 tile designs are intended to support expansion of the list of qualities used in curation - as has already happened.
Error creating thumbnail: Unable to save thumbnail to destination

Display qualities using colored icons strung along branches

  • Qualities are displayed with consistent icon, color and relative position along branches
  • As above, desaturated colors are used for inferred qualities
  • Additional icons may be added
Error creating thumbnail: Unable to save thumbnail to destination

Version 0

Display qualities using text icons adjacent to taxon names

  • user enters any entity term
  • each of the standard upper-level PATO qualities has some icon
  • each node of tree is annotated with icons for which kinds of phenotypes are exhibited by that node
  • so if you just put in "bone", you could get a "shape" icon at a node for any bone shape phenotype (basihyal bone round, vertebra 1 flat, etc.)

Trees3.png