Data Jamboree 2/Preparation
- Things to prepare ahead of time
- Have flipcharts, markers, and tape (or pushpins) for paper mockups
(OK - Paula)
- Need slims for TAO and PATO (Done - Wasila, Jim)
- Curation Exercise
- Revise same (Group annotation exercise) from data jamboree 1
- Move making Taxon list to beginning; make matrix to merge; add
instructions (- Done WD 9/22)
- Keep exercise to 1 hour
- Phenex documentation (Jim)
- Upload to fileshare; print hard copies for all participants
(Paula); email to participants (Wasila)
- Consistency Experiment
- Revise so that results are publishable (Wasila & all) - low
priority
- Get feedback on experiment from advisors ahead of time (emailed
advisors, 9/24 - Wasila)
- Upload to fileshare; print hard copies for all participants; email
to participants (Wasila)
- Revise Annotation guide on wiki – (Wasila &
curators)
- Things to contact participants about ahead of time (develop letter
prior to conference call - Done PM Sept 17)
- bring laptops (Mac or PC - Jim will ask and send them Java download
link)
- how to download Phenex (Jim will send instructions), Mesquite
(Peter will send instructions); links to each
- how to subscribe to Phenoscape-curators and Teleost-discuss (- Done
WD Sept 18)
- send link for to Phenoscape publications spreadsheet (public access
now) (Wasila)
- email each of the four participants pdfs of 3 or 4 (Grande) assigned
papers and 3 or 4 Phenex files (Wasila)
- Curation
- Papers for four ichthylogists selected and in process of being
merged and updated with character descriptions (Paula)
- Plan to add TAO terms for EQ annotation at SD workshop (Wasila)
- Plan to add TTO taxa and make corrections at SD workshop (Peter)
- Participant papers
- Correspond with participants regarding their three assigned
publications for annotation at the data jamboree -
- Wasila contacts: Sabaj Perez (Lundberg) - Done (WD)
- Paula contacts: Grande & Mayden & Hilton - (done 12 Sept PM)
- Prepare neXML files for each participant (see Phenoscape Google
spreadsheet for status; Paula)
- Include taxon list, matrix, character and state descriptions
filled in (Paula)
- Prepare CD with copies of neXML files for each participant (Paula)
- Provide corresponding pdf file for each neXML file
- Participant-personnel pairs:
- Grande (with Wasila Dahdul)
- Hilton (with Jim Balhoff)
- Mayden (with Paula Mabee)
- Sabaj Perez (with John Lundberg)
(Peter Midford, Jeff Engeman (and Mike Wallinga) are “floater” curators)
- Finalize agenda - done (PM)
- Bring data projector (Paula - OK)
- Copies of pubs (1 each; Paula)
