Difference between revisions of "KB build process"

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(Created page with "The Phenoscape KB build process goes through several steps in converting input data sources to a queryable knowledgebase. This page provides some description for each of the s...")
 
(OWL conversion)
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==OWL conversion==
 
==OWL conversion==
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The Phenoscape Knowledgebase works as a single unified OWL model. While some inputs (e.g. the shared ontologies such as [http://uberon.org/ Uberon] and [http://purl.obolibrary.org/obo/pato PATO]) are natively distributed as OWL documents, others are converted to OWL from some other representation.
  
 
==Identifier cleanup==
 
==Identifier cleanup==

Revision as of 20:31, 24 February 2014

The Phenoscape KB build process goes through several steps in converting input data sources to a queryable knowledgebase. This page provides some description for each of the steps.

OWL conversion

The Phenoscape Knowledgebase works as a single unified OWL model. While some inputs (e.g. the shared ontologies such as Uberon and PATO) are natively distributed as OWL documents, others are converted to OWL from some other representation.

Identifier cleanup

Axiom generation

Materialization of inferred axioms

Assertion of absence hierarchy