Difference between revisions of "Resources for Data Contributors"
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===On the web=== | ===On the web=== | ||
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Many ontologies are available for browsing at the [http://www.bioontology.org/ncbo/faces/index.xhtml NCBO BioPortal]. For example: | Many ontologies are available for browsing at the [http://www.bioontology.org/ncbo/faces/index.xhtml NCBO BioPortal]. For example: | ||
* [http://www.bioontology.org/ncbo/faces/pages/ontology_details.xhtml?ontology_display_name=Zebrafish%20anatomy%20and%20development Zebrafish anatomy and development] | * [http://www.bioontology.org/ncbo/faces/pages/ontology_details.xhtml?ontology_display_name=Zebrafish%20anatomy%20and%20development Zebrafish anatomy and development] | ||
Revision as of 17:53, 7 June 2007
Viewing ontologies
On the web
Many ontologies are available for browsing at the NCBO BioPortal. For example:
Click the "Visualize" button on the ontology's homepage to browse it graphically.
The taxonomic ontology is not yet available, but it will be generated from the Catalog of Fishes.
On your desktop
You can download the ontologies as OBO files from the above web sites. You can download and install OBO-Edit to view in a desktop application.
Annotating phenotypes
We are working on a specialized EQ Editor for data curation. Until it is ready for use, EQ annotations can be created using Phenote. You can download a customized Phenote configuration file which is suited to our data. See the instructions on how to use a custom configuration.
