Difference between revisions of "Data Jamboree 1/Annotation Experiment"
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=====Summary Statistics===== | =====Summary Statistics===== | ||
Revision as of 18:13, 24 April 2008
Background and Participant Preparation
An annotation experiment was conducted on day 2 of the Phenoscape Data Jamboree in order to assess curation consistency among the four trained participants. Participant training consisted of a hands-on group annotation exercise on day 1, and individual work on each participant's own publications with assistance from project personnel on days 1 and 2. Participants were also given an Annotation Guide with examples of character types commonly encountered in the fish systematic literature. Participants were given 2 hours to annotate 10 characters (plus one extra credit) taken from three publications (Hilton 2003, Sanger and McCune 2002, Zanata and Vari 2005).
Results
Three of the four participants completed all 11 characters, while one participant finished only 7 characters.
Summary Statistics
| Character # | # Participants with Annotation* | % Consistency with Key | Specific Issues |
|---|---|---|---|
| 1 | 4 | 100 | |
| 2 | 3 | 0 | post-composition of Q term for relative length |
| 3 | 3 | 0 | incorrect recording of count values |
| 4 | 4 | 0 | TAO term definition confusion (bone vs. cartilage) |
| 5 | 3 | 33 | E post-composition; choice of appropriate Q |
| 6 | 4 | 0 | E post-composition |
| 7 | 4 | 50 | E post-composition |
| 8 | 3 | 33 | choice of appropriate Q term |
| 9 | 3 | 0 | E post-composition; choice of appropriate Q term |
| 10 | 2 | 50 | choice of appropriate Q term |
| EC | 2 | 25 | anatomy term post-composition; choice of appropriate quality term |
- *incomplete annotations due to software issues were excluded
References
- Hilton EJ. 2003. Comparative osteology and phylogenetic systematics of fossil and living bony-tongue fishes (Actinopterygii, Teleostei, Osteoglossomorpha). Zoological Journal of the Linnean Society 137: 1-100.
- Sanger TJ, McCune AR. 2002. Comparative osteology of the Danio (Cyprinidae: Ostariophysi) axial skeleton with comments on Danio relationships based on molecules and morphology. Zoological Journal of the Linnean Society 135:529-546.
- Zanata AM, Vari RP. 2005. The family Alestidae (Ostariophysi, Characiformes): a phylogenetic analysis of a trans-Atlantic clade. Zoological Journal of the Linnean Society 145: 1-144.
