Difference between revisions of "Resources for Data Contributors"
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Phenex was developed by Phenoscape for annotation of evolutionary phenotypes. Phenex can be downloaded at: | Phenex was developed by Phenoscape for annotation of evolutionary phenotypes. Phenex can be downloaded at: | ||
Revision as of 16:36, 22 October 2008
Contents
1. Download Most Recent Version of Phenex
Phenex was developed by Phenoscape for annotation of evolutionary phenotypes. Phenex can be downloaded at:
https://sourceforge.net/project/showfiles.php?group_id=76834&package_id=295042
For Mac, click on the link "phenex-1.0-beta12-mac.zip"
For Windows, click on the link "phenex-1.0-beta12-win.zip"
Installation and start up
You need Java 1.5 or newer to run Phenex. For the Mac this requires Mac OS X 10.4 or newer. How to check your java version:
- Windows:
Go to http://www.java.com. Click on "Do I have Java?". On the following page don't worry if it says "Oops! You don't have the recommended Java installed." Look at the next line where it might say "Your Java version is Version 6 update 5". It should be Version 5 or higher. If you don't have Java at all or have an older version, please click on the Download Java Now link and install it.
- Mac:
If you have a Mac, you should be fine if you have Mac OS X 10.4 or higher (Java comes with the system). Click on the Apple menu at the left of your menubar, and choose "About This Mac". Under "Mac OS X" it should have the Mac OS version number.
Access Project Files
Phenoscape project files are xml files created by Phenex and housed a data repository. Instructions for accessing the data repository can be found here .
Taxon Lists
Guide to Character Annotation
Ontology change requests
- Term Request Instructions
- Links to ontology term trackers
