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− | ==Data loader==
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− | A data loader application to refresh the data in the Phenoscape database on a daily basis is under development. The application is being developed as a Perl module which:
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− | # Downloads curated NeXML files from the Phenoscape SVN repositories
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− | # Drops and recreates the database
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− | # Loads the requisite ontologies into the database
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− | # Loads the data from the curated NeXML files into the database, and
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− | # Invokes the OBD reasoner to elicit implicit information from the data and adds them to the database
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− | ==Web services==
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− | ===Term info===
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− | '''URI'''
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− | ../info/{termID}
| + | [[Category:Informatics]] |
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− | '''Returns'''
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− | JSON:
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− | <javascript>
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− | {
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− | "id" : "TAO:0001700",
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− | "name" : "caudal-fin stay",
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− | "definition" : "Bone that is located anterior to the caudal procurrent rays. Caudal fin stays are unpaired bone."
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− | "parents" :
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− | [
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− | {
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− | "relation" : "OBO_REL:is_a",
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− | "id" : "TAO:0001514",
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− | "name" : "bone"
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− | },
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− | {
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− | "relation" : "OBO_REL:part_of",
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− | "id" : "TAO:0000862",
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− | "name" : "caudal fin skeleton"
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− | }
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− | ],
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− | "children" : [] // if there are children should be same format as parents
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− | }
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− | // how should xrefs, etc. be represented, property_value definitions?
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− | </javascript>
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− | If there is no term with the given ID, the service should return "404 Not Found".
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− | ===Autocomplete===
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