Difference between revisions of "Anatomy Ontology Conf calls"

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(Agenda)
(Minutes)
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===Minutes===
 
===Minutes===
 +
* Wasila will demonstrate diffs between Uberon and MA usingnon-skeletal terms
 +
** e.g. 'naris' in mouse is 'part of nose'
 +
** e.g. 'naris' in uberon with lots of xrefs but missing relationship 'part of' olfactory apparatus
 +
* not sure how often Chris updates Uberon
 +
 +
 +
* Judy: 
 +
** Discussion on how to initiate the Amniote Anatomy Ontology for terms outside skeletal system 
 +
** Report on status of unified anatomy [emap + MA]
 +
** What exactly is abstract mouse?
 +
** Clone MA, UBERON, unified mouse [emap + MA], or abstract mouse?
 +
* Monte:
 +
** Discussion on moving ZFA to GO like model; possibility of implementing VAO import (so that XAO can just clone this VAO chunk when they also clone the rest of ZFA)
 +
* Aaron and Jeff:
 +
** Discussion on setting up modular ontology model and specifics of importing model species-specific information (like devo stage)

Revision as of 20:14, 13 June 2011


June 13, 2011

Participating: Monte Westerfield, Paula Mabee, Judy Blake, Aaron Zorn, Jeff Bowes, Wasila Dahdul, Jim Balhoff

Agenda

  • Judy:
    • Discussion on how to initiate the Amniote Anatomy Ontology for terms outside skeletal system
    • Report on status of unified anatomy [emap + MA]
    • What exactly is abstract mouse?
    • Clone MA, UBERON, unified mouse [emap + MA], or abstract mouse?
  • Monte:
    • Discussion on moving ZFA to GO like model; possibility of implementing VAO import (so that XAO can just clone this VAO chunk when they also clone the rest of ZFA)
  • Aaron and Jeff:
    • Discussion on setting up modular ontology model and specifics of importing model species-specific information (like devo stage)

Minutes

  • Wasila will demonstrate diffs between Uberon and MA usingnon-skeletal terms
    • e.g. 'naris' in mouse is 'part of nose'
    • e.g. 'naris' in uberon with lots of xrefs but missing relationship 'part of' olfactory apparatus
  • not sure how often Chris updates Uberon


  • Judy:
    • Discussion on how to initiate the Amniote Anatomy Ontology for terms outside skeletal system
    • Report on status of unified anatomy [emap + MA]
    • What exactly is abstract mouse?
    • Clone MA, UBERON, unified mouse [emap + MA], or abstract mouse?
  • Monte:
    • Discussion on moving ZFA to GO like model; possibility of implementing VAO import (so that XAO can just clone this VAO chunk when they also clone the rest of ZFA)
  • Aaron and Jeff:
    • Discussion on setting up modular ontology model and specifics of importing model species-specific information (like devo stage)