Difference between revisions of "Data Jamboree 2/Agenda"
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== Sunday, Sept. 28 == | == Sunday, Sept. 28 == | ||
| − | * 8:00 am: Phenoscape Introduction (Paula); project personnel and participant introductions | + | * 8:00 am: [[Media:PaulaMabee.ppt | Phenoscape Introduction ]] (Paula); project personnel and participant introductions |
| − | * 8:30 am: Synthetic research databases for model organisms (Monte Westerfield) | + | * 8:30 am: [[Media:MonteWesterfield.ppt |Synthetic research databases for model organisms ]] (Monte Westerfield) |
| − | * 8:45 am: Phenotype-genotype relationships in the mouse (MGI) database | + | * 8:45 am: [[Media:JudyBlake.ppt | Phenotype-genotype relationships in the mouse (MGI) database]] (Judy Blake) |
| − | * 9: | + | * 9:15 am: [[Media:SuziLewis.ppt | Mining phenotypes annotated using entity-quality syntax]] (Suzi Lewis) |
| − | * 9: | + | * 9:45 am: Phenoscape data policy (Todd Vision) |
| − | * | + | * 10:00 am: Phenex introduction (Jim Balhoff) |
* 10:30 am: '''''Coffee break''''' (15 min) | * 10:30 am: '''''Coffee break''''' (15 min) | ||
| − | * 10:45 am: | + | * 10:45 am: Curation Exercise (Wasila Dahdul) |
| − | * 12:00 pm: '''''Lunch''''' | + | * 12:00 pm: '''''Box Lunch at Higher Education Center''''' |
* 1:00 pm: Data curation: work on individual data | * 1:00 pm: Data curation: work on individual data | ||
* 3:00 pm: '''''Coffee break''''' (15 min) | * 3:00 pm: '''''Coffee break''''' (15 min) | ||
| − | * 3: | + | * 3:30 pm: [[Data Jamboree 2/Notes#User interface|Phenoscape user interface introduction]] (Jim Balhoff) |
| − | * | + | * 4:45 pm: Wrap up and discussion of curation issues |
* 6:00 pm: Dinner in Rapid City (Botticellis) | * 6:00 pm: Dinner in Rapid City (Botticellis) | ||
| Line 28: | Line 28: | ||
* 1:00 pm: Drive to Sylvan lake lodge, check in | * 1:00 pm: Drive to Sylvan lake lodge, check in | ||
* 2:00 pm: Data curation: work on individual data; begin individual meetings with Cartik, Hilmar, and Todd to look at mock-ups (web-based and paper) of Phenoscape user interface. | * 2:00 pm: Data curation: work on individual data; begin individual meetings with Cartik, Hilmar, and Todd to look at mock-ups (web-based and paper) of Phenoscape user interface. | ||
| − | * | + | * 7:00 pm: Dinner at Sylvan Lodge |
== Tuesday, Sept. 30 == | == Tuesday, Sept. 30 == | ||
* 8:00 am: [[WG:All-Hands_Meeting_30Sep08|Project personnel meeting agenda]] concurrent with Data curation | * 8:00 am: [[WG:All-Hands_Meeting_30Sep08|Project personnel meeting agenda]] concurrent with Data curation | ||
*9:45 am: '''''Coffee break''''' | *9:45 am: '''''Coffee break''''' | ||
| − | *10:00 am: Curation consistency experiment (1 hr) concurrent with Project personnel meeting | + | *10:00 am: [[Data Jamboree 2/Annotation Experiment|Curation consistency experiment]] (1 hr) concurrent with Project personnel meeting |
* 11:00 am: Review and discussion of consistency experiment (Project personnel and curators present) | * 11:00 am: Review and discussion of consistency experiment (Project personnel and curators present) | ||
| − | * 12:00 pm: '''''Lunch''''' | + | * 12:00 pm: ''''' Box Lunch - take to lake or veranda''''' |
* 1:00 pm: Project personnel meeting concurrent with Data curation | * 1:00 pm: Project personnel meeting concurrent with Data curation | ||
* 3:00 pm: '''''Coffee break''''' | * 3:00 pm: '''''Coffee break''''' | ||
Latest revision as of 03:57, 7 October 2008
Agenda for the 2nd Phenoscape Data Jamboree and Project Meeting, held in South Dakota:
Contents
Saturday, Sept. 27
Travel day for participants and project personnel
- Fly into Rapid City, South Dakota (Paula & co. will pick you up at airport)
- Meet for dinner (at the Firehouse) and overnight at Radisson hotel, Rapid City
Sunday, Sept. 28
- 8:00 am: Phenoscape Introduction (Paula); project personnel and participant introductions
- 8:30 am: Synthetic research databases for model organisms (Monte Westerfield)
- 8:45 am: Phenotype-genotype relationships in the mouse (MGI) database (Judy Blake)
- 9:15 am: Mining phenotypes annotated using entity-quality syntax (Suzi Lewis)
- 9:45 am: Phenoscape data policy (Todd Vision)
- 10:00 am: Phenex introduction (Jim Balhoff)
- 10:30 am: Coffee break (15 min)
- 10:45 am: Curation Exercise (Wasila Dahdul)
- 12:00 pm: Box Lunch at Higher Education Center
- 1:00 pm: Data curation: work on individual data
- 3:00 pm: Coffee break (15 min)
- 3:30 pm: Phenoscape user interface introduction (Jim Balhoff)
- 4:45 pm: Wrap up and discussion of curation issues
- 6:00 pm: Dinner in Rapid City (Botticellis)
Monday, Sept. 29
- 5:00 am: Check out; drive to Buffalo roundup
- 6:00 am: Buffalo roundup - participants driven to Custer State Park (~45 min)
- 12:00 pm: Lunch at roundup
- 1:00 pm: Drive to Sylvan lake lodge, check in
- 2:00 pm: Data curation: work on individual data; begin individual meetings with Cartik, Hilmar, and Todd to look at mock-ups (web-based and paper) of Phenoscape user interface.
- 7:00 pm: Dinner at Sylvan Lodge
Tuesday, Sept. 30
- 8:00 am: Project personnel meeting agenda concurrent with Data curation
- 9:45 am: Coffee break
- 10:00 am: Curation consistency experiment (1 hr) concurrent with Project personnel meeting
- 11:00 am: Review and discussion of consistency experiment (Project personnel and curators present)
- 12:00 pm: Box Lunch - take to lake or veranda
- 1:00 pm: Project personnel meeting concurrent with Data curation
- 3:00 pm: Coffee break
- 3:15 pm: Project personnel meeting concurrent with Data curation
- 4:30 pm: Leave for dinner
- 5:00 pm: Dinner at the Alpine Inn (Hill City)
- 6:30 pm: Leave Hill City to go to Mt. Rushmore for lighting ceremony (at 8:00 pm, with time to look around from 7-8)
Wednesday, Oct. 1
- 8:00 am: Data curation
- 10:00 am: Coffee & begin to wrap up discussion
- 12:00 pm: Participants depart (transportation to Rapid City airport provided)
