Map Qualities on Tree

Map Qualities on Tree

Version 2

Access from Entity Page via tree button

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Display qualities using a grid of colored tiles

• Qualities are displayed with consistent location and color in the grid
• Desaturated colors are used for qualities of phenotypes that are inferred, rather than annotated
  • Note annotation to Ictaluridae in this and next candidate example
• The 16 tile designs are intended to support expansion of the list of qualities used in curation - as has already happened.

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Display qualities using colored icons strung along branches

• Qualities are displayed with consistent icon, color and relative position along branches
• As above, desaturated colors are used for inferred qualities
• Additional icons may be added

Error creating thumbnail: Unable to save thumbnail to destination

Version 1

Display qualities using a grid of colored tiles

• Qualities are displayed with consistent location and color in the grid
• Desaturated colors are used for qualities of phenotypes that are inferred, rather than annotated
  • Note annotation to Ictaluridae in this and next candidate example
• The 16 tile designs are intended to support expansion of the list of qualities used in curation - as has already happened.

Error creating thumbnail: Unable to save thumbnail to destination

Display qualities using colored icons strung along branches

• Qualities are displayed with consistent icon, color and relative position along branches
• As above, desaturated colors are used for inferred qualities
• Additional icons may be added

Error creating thumbnail: Unable to save thumbnail to destination

Version 0

Display qualities using text icons adjacent to taxon names

• user enters any entity term
• each of the standard upper-level PATO qualities has some icon
• each node of tree is annotated with icons for which kinds of phenotypes are exhibited by that node
• so if you just put in "bone", you could get a "shape" icon at a node for any bone shape phenotype (basihyal bone round, vertebra 1 flat, etc.)