Roadmap for first iteration
From phenoscape
This is a development roadmap for the first production iteration of the Phenoscape database and web interface, for introduction at the SICB 2009 meeting.
Contents
Nov. 10-14
Jim
- Document interface design requirements on wiki
- Investigate additional data service needs required by interface
- Start Rails web interface project
- Write EQ count script using Ruby
Cartik
- Set up Eclipse project for Restlet based web service application in OBD-WS
- Begin implementing Term Info service
- Write code to parse ZFIN phenotype data and load into OBD
- See http://zfin.org/zf_info/downloads.html#phenotype
- Data: http://zfin.org/data_transfer/Downloads/pheno_obo.txt
- should use "exhibits" relation
Nov. 17-21
Jim
- Document data retrieval web service specifications
- Implement Rails app skeleton and begin coding front page
- Implement reusable JavaScript term info panel
Cartik
- Complete Term Info service
- Enhance OBD data loader pipeline to perform pre-processing of ZFA ontology, replacing xrefs with is_a links to TAO
- These xrefs seem to still be in TAO - may have to fix that or work around
- Implement autocomplete service
Nov. 24-28
Jim
- mostly on vacation
Cartik
- Implement first data service (requirements pending).
Dec. 1-5
Jim
- Implement anatomy interface
- Begin using autocomplete and term info services in interface
Cartik
Dec. 8-12
Jim
- Implement taxon interface
- Begin gene interface
Cartik
Dec. 15-19
Jim
- Complete gene interface
