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- Problem Log Format (23:59, 10 January 2009)
- Taxonomy ontology: ranks, unknown/unnamed species, & related issues (00:01, 11 January 2009)
- ZFIN anatomy annotation counts (00:02, 11 January 2009)
- Data Jamboree 1 (19:28, 11 January 2009)
- Needs Analysis Workshop (19:29, 11 January 2009)
- Current queries (19:52, 20 January 2009)
- Queries and Query Execution Plans (20:30, 21 January 2009)
- Synchronization Tool (22:05, 23 January 2009)
- Queries for Phenoscape UI demo'ed at SICB, Boston in Jan 2009 (20:12, 28 January 2009)
- SummerTraining2009 (02:51, 2 February 2009)
- Relating taxa to phenotypes (03:06, 10 February 2009)
- Queries to be implemented in the future (18:19, 12 February 2009)
- Storing publication reference information (22:29, 18 February 2009)
- OpenURL (23:39, 18 February 2009)
- Amphibanat Phenex downloads (19:21, 19 March 2009)
- Entities with taxonomic context (14:26, 30 March 2009)
- Query strategy performance (16:37, 24 April 2009)
- Neglected items (13:37, 30 April 2009)
- Phenoscape Grant Renewal Workshop/Notes (17:34, 22 May 2009)
- Author Guide (21:32, 15 June 2009)