Difference between revisions of "Data Jamboree 2/Preparation"
From phenoscape
Paula Mabee (talk | contribs) |
Paula Mabee (talk | contribs) |
||
| Line 18: | Line 18: | ||
**send link for to Phenoscape publications spreadsheet (public access now) | **send link for to Phenoscape publications spreadsheet (public access now) | ||
**email each of the four participants pdfs of 3 assigned papers and 3 Phenex files | **email each of the four participants pdfs of 3 assigned papers and 3 Phenex files | ||
| − | + | * Curation | |
| − | + | **Papers for four ichthylogists selected and in process of being merged and updated with character descriptions | |
| − | + | ** Plan to add TAO terms for EQ annotation at SD workshop (Wasila) | |
| + | ** Plan to add TTO taxa and make corrections at SD workshop (Peter) | ||
*Participant papers | *Participant papers | ||
**Correspond with participants regarding their three assigned publications for annotation at the data jamboree | **Correspond with participants regarding their three assigned publications for annotation at the data jamboree | ||
Revision as of 21:09, 16 September 2008
- Things to prepare ahead of time
- Need slims for TAO and PATO (Wasila, Jim)
- Curation Exercise
- Revise same (Group annotation exercise) from data jamboree 1
- Move making Taxon list to beginning; make matrix to merge; add instructions (Wasila)
- Keep exercise to 1 hour
- Phenex documentation (Jim)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Revise same (Group annotation exercise) from data jamboree 1
- Consistency Experiment
- Revise so that results are publishable (Wasila & all)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Annotation guide revise (Wasila)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Things to contact participants about ahead of time (develop letter prior to conference call)
- bring laptops (Mac or PC?)
- how to download Phenex, Mesquite; links to each
- how to subscribe to Phenoscape-curators and Teleost-discuss
- send link for to Phenoscape publications spreadsheet (public access now)
- email each of the four participants pdfs of 3 assigned papers and 3 Phenex files
- bring laptops (Mac or PC?)
- Curation
- Papers for four ichthylogists selected and in process of being merged and updated with character descriptions
- Plan to add TAO terms for EQ annotation at SD workshop (Wasila)
- Plan to add TTO taxa and make corrections at SD workshop (Peter)
- Participant papers
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree
- Wasila contacts: Sabaj Perez (Lundberg)
- Paula contacts: Grande & Mayden & Hilton (done 12 Sept PM)
- Prepare neXML files for each participant (see Phenoscape Google spreadsheet for status)
- Include taxon list, matrix, character and state descriptions filled in
- Prepare CD or USB key with copies of neXML files for each participant
- Provide corresponding pdf file for each neXML file
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree
- Participant-personnel pairs:
- Grande (with Wasila Dahdul)
- Hilton (with Jim Balhoff)
- Mayden (with Paula Mabee)
- Sabaj Perez (with John Lundberg)
(Peter Midford, Jeff Engeman (and Mike Wallinga if attends?) are "floater" curators)
- Finalize agenda
- Copies of pubs (2 each)
