Difference between revisions of "Data Jamboree 2/Preparation"
From phenoscape
| Line 10: | Line 10: | ||
**Consistency Experiment | **Consistency Experiment | ||
***Revise so that results are publishable (Wasila & all) - low priority | ***Revise so that results are publishable (Wasila & all) - low priority | ||
| − | ***Get feedback on experiment from advisors ahead of time | + | ***Get feedback on experiment from advisors ahead of time (Wasila) |
***Upload to fileshare; print hard copies for all participants; email to participants (Wasila) | ***Upload to fileshare; print hard copies for all participants; email to participants (Wasila) | ||
| − | **Revise [[Guide_to_Character_Annotation|Annotation guide]] on wiki -- (Wasila) | + | **Revise [[Guide_to_Character_Annotation|Annotation guide]] on wiki -- (Wasila & curators) |
***Upload to fileshare; print hard copies for all participants; email to participants (Wasila) | ***Upload to fileshare; print hard copies for all participants; email to participants (Wasila) | ||
| − | *Things to contact participants about ahead of time (develop letter prior to conference call) | + | *Things to contact participants about ahead of time (develop letter prior to conference call ''- Done PM Sept 17'') |
**bring laptops (Mac or PC?) | **bring laptops (Mac or PC?) | ||
***how to download Phenex, Mesquite; links to each | ***how to download Phenex, Mesquite; links to each | ||
| Line 30: | Line 30: | ||
**Prepare neXML files for each participant (see Phenoscape Google spreadsheet for status) | **Prepare neXML files for each participant (see Phenoscape Google spreadsheet for status) | ||
***Include taxon list, matrix, character and state descriptions filled in | ***Include taxon list, matrix, character and state descriptions filled in | ||
| − | ***Prepare CD | + | ***Prepare CD with copies of neXML files for each participant |
**Provide corresponding pdf file for each neXML file | **Provide corresponding pdf file for each neXML file | ||
*Participant-personnel pairs: | *Participant-personnel pairs: | ||
Revision as of 17:58, 17 September 2008
- Things to prepare ahead of time
- Have flipcharts, markers, and tape (or pushpins) for paper mockups
- Need slims for TAO and PATO (Wasila, Jim)
- Curation Exercise
- Revise same (Group annotation exercise) from data jamboree 1
- Move making Taxon list to beginning; make matrix to merge; add instructions (Wasila)
- Keep exercise to 1 hour
- Phenex documentation (Jim)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Revise same (Group annotation exercise) from data jamboree 1
- Consistency Experiment
- Revise so that results are publishable (Wasila & all) - low priority
- Get feedback on experiment from advisors ahead of time (Wasila)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Revise Annotation guide on wiki -- (Wasila & curators)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Things to contact participants about ahead of time (develop letter prior to conference call - Done PM Sept 17)
- bring laptops (Mac or PC?)
- how to download Phenex, Mesquite; links to each
- how to subscribe to Phenoscape-curators and Teleost-discuss
- send link for to Phenoscape publications spreadsheet (public access now)
- email each of the four participants pdfs of 3 assigned papers and 3 Phenex files
- bring laptops (Mac or PC?)
- Curation
- Papers for four ichthylogists selected and in process of being merged and updated with character descriptions
- Plan to add TAO terms for EQ annotation at SD workshop (Wasila)
- Plan to add TTO taxa and make corrections at SD workshop (Peter)
- Participant papers
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree -
- Wasila contacts: Sabaj Perez (Lundberg) - Done (WD)
- Paula contacts: Grande & Mayden & Hilton - (done 12 Sept PM)
- Prepare neXML files for each participant (see Phenoscape Google spreadsheet for status)
- Include taxon list, matrix, character and state descriptions filled in
- Prepare CD with copies of neXML files for each participant
- Provide corresponding pdf file for each neXML file
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree -
- Participant-personnel pairs:
- Grande (with Wasila Dahdul)
- Hilton (with Jim Balhoff)
- Mayden (with Paula Mabee)
- Sabaj Perez (with John Lundberg)
(Peter Midford, Jeff Engeman (and Mike Wallinga if attends?) are "floater" curators)
- Finalize agenda
- Copies of pubs (2 each)
