Difference between revisions of "Data Jamboree 2/Preparation"
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**bring laptops (Mac or PC - Jim will ask and send them Java download linnk) | **bring laptops (Mac or PC - Jim will ask and send them Java download linnk) | ||
***how to download Phenex (Jim will send instructions), Mesquite (Peter will send instructions); links to each | ***how to download Phenex (Jim will send instructions), Mesquite (Peter will send instructions); links to each | ||
| − | **how to subscribe to Phenoscape-curators and Teleost-discuss | + | **how to subscribe to Phenoscape-curators and Teleost-discuss (- Done WD Sept 18) |
**send link for to Phenoscape publications spreadsheet (public access now) | **send link for to Phenoscape publications spreadsheet (public access now) | ||
**email each of the four participants pdfs of 3 assigned papers and 3 Phenex files | **email each of the four participants pdfs of 3 assigned papers and 3 Phenex files | ||
Revision as of 15:33, 18 September 2008
- Things to prepare ahead of time
- Have flipcharts, markers, and tape (or pushpins) for paper mockups
- Need slims for TAO and PATO (Wasila, Jim)
- Curation Exercise
- Revise same (Group annotation exercise) from data jamboree 1
- Move making Taxon list to beginning; make matrix to merge; add instructions (Wasila)
- Keep exercise to 1 hour
- Phenex documentation (Jim)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Revise same (Group annotation exercise) from data jamboree 1
- Consistency Experiment
- Revise so that results are publishable (Wasila & all) - low priority
- Get feedback on experiment from advisors ahead of time (Wasila)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Revise Annotation guide on wiki -- (Wasila & curators)
- Upload to fileshare; print hard copies for all participants; email to participants (Wasila)
- Things to contact participants about ahead of time (develop letter prior to conference call - Done PM Sept 17)
- bring laptops (Mac or PC - Jim will ask and send them Java download linnk)
- how to download Phenex (Jim will send instructions), Mesquite (Peter will send instructions); links to each
- how to subscribe to Phenoscape-curators and Teleost-discuss (- Done WD Sept 18)
- send link for to Phenoscape publications spreadsheet (public access now)
- email each of the four participants pdfs of 3 assigned papers and 3 Phenex files
- bring laptops (Mac or PC - Jim will ask and send them Java download linnk)
- Curation
- Papers for four ichthylogists selected and in process of being merged and updated with character descriptions
- Plan to add TAO terms for EQ annotation at SD workshop (Wasila)
- Plan to add TTO taxa and make corrections at SD workshop (Peter)
- Participant papers
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree -
- Wasila contacts: Sabaj Perez (Lundberg) - Done (WD)
- Paula contacts: Grande & Mayden & Hilton - (done 12 Sept PM)
- Prepare neXML files for each participant (see Phenoscape Google spreadsheet for status)
- Include taxon list, matrix, character and state descriptions filled in
- Prepare CD with copies of neXML files for each participant
- Provide corresponding pdf file for each neXML file
- Correspond with participants regarding their three assigned publications for annotation at the data jamboree -
- Participant-personnel pairs:
- Grande (with Wasila Dahdul)
- Hilton (with Jim Balhoff)
- Mayden (with Paula Mabee)
- Sabaj Perez (with John Lundberg)
(Peter Midford, Jeff Engeman (and Mike Wallinga if attends?) are "floater" curators)
- Finalize agenda - done (PM)
- Bring data projector (Paula)
- Copies of pubs (2 each)
