Difference between revisions of "Annotator tutorial topics"
From phenoscape
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Agenda- topics and software for curator training: | Agenda- topics and software for curator training: | ||
| − | Overview of curation workflow | + | Overview of curation workflow and software involved |
====Ontology development:==== | ====Ontology development:==== | ||
Latest revision as of 20:34, 29 November 2012
Agenda- topics and software for curator training: Overview of curation workflow and software involved
Contents
Ontology development:
Protege tutorial
Ontology development principles:
OBO foundry principles (orthogonality, single inheritance, versioning, etc...) Genus-differentia definitions
Online resources and mailing lists (bookmark)
Term trackers (PATO, RO, CARO, Uberon)
OBO Foundry
BioPortal
Mailing lists: Phenoscape-curators, obo-anatomy, obo-discuss
Curation training
EQ annotation - Review wiki Guide to Character Annotation
Phenex
Matrix and free text entry in Mesquite and/OR direct import into Phenex
Subversion and use of SmartSVN
Mendeley
Phenoscape Curation Log in Google Docs
Taxon lists update
Endnote and publication identifiers
Ontology editing and updating
SVN, SmartSVN
Term request workflow; proposed ORB workflow
