Difference between revisions of "Needs Analysis Workshop/Prioritization"

From phenoscape
 
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===Discussion===
+
===Additional data types and query constraints===
  
 
* Other data types or dimensions we haven't looked at
 
* Other data types or dimensions we haven't looked at
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* Integrating genetic data
 
* Integrating genetic data
  
Visualizations:
+
===Visualizations:===
 
* body map
 
* body map
 
* filtering options
 
* filtering options
 
* visualizing the ontology
 
* visualizing the ontology
 
* external data types, link-out to NCBI
 
* external data types, link-out to NCBI

Revision as of 16:38, 19 September 2007

Additional data types and query constraints

  • Other data types or dimensions we haven't looked at
    • Time: e.g., developmental time-series
    • Geography
  • Abilities to restrict traits by
    • high-level character modules
    • gene
    • GO
    • location
    • developmental stage
    • availability of sufficient data

Prioritization

  • Character mapping on trees
  • Correlation matrix of traits
  • Downloadable reports of query results
  • Identifying clades which traits vary
  • Phenotypic BLAST to discover similar phenotypes and similar OTUs
  • Discovery of genetic or evolutionary modules
  • Integrating genetic data

Visualizations:

  • body map
  • filtering options
  • visualizing the ontology
  • external data types, link-out to NCBI