Difference between revisions of "Needs Analysis Workshop/Prioritization"

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===Discussion===
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===Additional data types and query constraints===
 
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[[Image:Day2-dataintegration.whiteboard.JPG|thumb|right|384px|Data interrelationships]]
 
* Other data types or dimensions we haven't looked at
 
* Other data types or dimensions we haven't looked at
 
** Time: e.g., developmental time-series
 
** Time: e.g., developmental time-series
 
** Geography
 
** Geography
 
* Abilities to restrict traits by
 
* Abilities to restrict traits by
** high-level character modules
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** high-level character modules
 
** gene
 
** gene
 
** GO
 
** GO
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===Prioritization===
 
===Prioritization===
 
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[[Image:Day2-prioritization.whiteboard.JPG|thumb|right|384px|Priorities]]
 
* Character mapping on trees
 
* Character mapping on trees
 
* Correlation matrix of traits
 
* Correlation matrix of traits
* Downloadable reports of query results
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* Downloadable reports of query results (e.g. candidate genes; comparative phenotypic data)
* Identifying clades which traits vary
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* Identifying clades which traits vary (quick retrieval of character state distributions)
 
* Phenotypic BLAST to discover similar phenotypes and similar OTUs
 
* Phenotypic BLAST to discover similar phenotypes and similar OTUs
 
* Discovery of genetic or evolutionary modules
 
* Discovery of genetic or evolutionary modules
 
* Integrating genetic data
 
* Integrating genetic data
  
Visualizations:
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===Visualizations:===
 
* body map
 
* body map
 
* filtering options
 
* filtering options
 
* visualizing the ontology
 
* visualizing the ontology
 
* external data types, link-out to NCBI
 
* external data types, link-out to NCBI
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 +
[[Category:Needs Analysis Workshop]]

Latest revision as of 20:05, 18 January 2008

Additional data types and query constraints

Data interrelationships
  • Other data types or dimensions we haven't looked at
    • Time: e.g., developmental time-series
    • Geography
  • Abilities to restrict traits by
    • high-level character modules
    • gene
    • GO
    • location
    • developmental stage
    • availability of sufficient data

Prioritization

Priorities
  • Character mapping on trees
  • Correlation matrix of traits
  • Downloadable reports of query results (e.g. candidate genes; comparative phenotypic data)
  • Identifying clades which traits vary (quick retrieval of character state distributions)
  • Phenotypic BLAST to discover similar phenotypes and similar OTUs
  • Discovery of genetic or evolutionary modules
  • Integrating genetic data

Visualizations:

  • body map
  • filtering options
  • visualizing the ontology
  • external data types, link-out to NCBI