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- ...ma of this data repository and outlines the methods to load and query this data repository. == Data Repository ==18 KB (2,662 words) - 21:46, 14 December 2009
- #REDIRECT [[Conceptual Model of Data Warehouse]] '''Description of the data warehouse conceptual schema '''108 bytes (14 words) - 13:48, 21 August 2009
- '''File formats (for data downloads)'''263 bytes (36 words) - 19:55, 19 March 2012
- This page documents data integrity checks that would be useful to implement in a testing framework r = Data =862 bytes (119 words) - 21:41, 17 November 2011
- #REDIRECT [[Phenoscape data policy]]36 bytes (4 words) - 23:10, 29 October 2014
Page text matches
- ...tions|driving biological research questions]] that take advantage of these data to push the limits of what is currently possible, and to identify what info8 KB (1,031 words) - 19:29, 11 January 2009
- ...web-based interfaces to ensure that the system we are developing, and the data that we are collecting, will allow the research community to obtain answers ...t developmental and morphological phenotypes, single-gene mutant phenotype data from zebrafish would allow a detailed analysis of this issue for any evolut2 KB (332 words) - 05:26, 10 September 2008
- - structure of data would be fluid PM - data is representation of current knowledge - can change over time5 KB (829 words) - 20:03, 18 January 2008
- * collect imaging data, have sparser data on electrophysiology time series * kinds of data collected: expression imaging, histological sections, videos of behavior7 KB (1,020 words) - 20:03, 18 January 2008
- ...d ways for doing character reconstruction - user will probably want to get data and run themselves3 KB (480 words) - 20:04, 18 January 2008
- -have sets of data mapped on tree – for example , all in situs done for a particular gene… ...ave been done at all for species of interest; see which species have that data, download all the images.2 KB (308 words) - 20:04, 18 January 2008
- * need environmental, ecological, and geographical data2 KB (289 words) - 20:04, 18 January 2008
- ===Additional data types and query constraints=== [[Image:Day2-dataintegration.whiteboard.JPG|thumb|right|384px|Data interrelationships]]1 KB (125 words) - 20:05, 18 January 2008
- [[Image:Day2-dataintegration.whiteboard.JPG|thumb|right|384px|Data interrelationships]] * Other data types or dimensions we haven't looked at3 KB (470 words) - 20:05, 18 January 2008
- ** how to link these two through, for example, a data repository3 KB (453 words) - 20:03, 18 January 2008
- HL – might get data on a mutant that indicate that the red dot changed position PM – would be nice to have a representation that let you see data in two different ways7 KB (1,183 words) - 20:04, 18 January 2008
- ...ets of their interest that took advantage and promoted reuse of the KB’s data and services. ...oevolutionary patterns. A similarly rich set of tools, such as ontologies, data annotation models, and machine reasoners, have also recently been introduce18 KB (2,453 words) - 00:15, 10 December 2019
- * Data curation: Dahdul et al. (2018), Dahdul et al. (2015), Cui et al. (2015), Ar * Data modeling, reasoning & ontologies: Mabee et al. (2020), Manda et al. (2016)52 KB (6,895 words) - 22:42, 17 November 2023
- ...ode phenotypic data from an existing publication into the EQ format. This data consists of descriptions of character state values for corresponding specie ===Data Model===7 KB (1,124 words) - 23:41, 10 January 2009
- ...otations to specimens within publications has been at issue. Our existing data model held all phenotype annotations at the level of particular specimens. Our discussion at the Biocuration meeting led to a new data model in which all phenotype annotations are expressed as properties of spe2 KB (393 words) - 21:55, 22 November 2008
- ...logical, spatial, and other requisite domain knowledge, the KB links these data to phenotypes reported in genetic perturbation studies for pertinent model For query answering the KB uses machine reasoning to match data by its semantics. The API also gives access to other machine reasoning-base1 KB (186 words) - 19:16, 26 September 2017
- In the process of annotating data files, curators may encounter terms in the data that have not yet been added to an appropriate ontology. Requesting a new o ...enoscape ontology editors can review the requested terms, independently of data annotation work. After adding a term to an appropriate ontology, or decidin3 KB (457 words) - 18:07, 13 November 2015
- ..., and software infrastructure and services, bringing together evolutionary data matrices annotated by Phenoscape curators, model organism phenotype and gen ==Data sources==9 KB (1,386 words) - 13:53, 20 March 2014
- The [http://www.evolutionaryontology.org/cdao Comparative Data Analysis Ontology] (CDAO) includes classes and properties for modeling phyl2 KB (350 words) - 20:31, 8 July 2013
- ...expressions are not equivalent but describe different aspects of the same data model.6 KB (853 words) - 20:39, 18 October 2013