Search results

Create the page "Data" on this wiki! See also the search results found.

• Neglected items
  ...gy (such as "millimeters"). These values are not imported into OBD by the data loader. Data matrices sometimes use the NEXUS format for specifying polymorphic states.
  3 KB (488 words) - 13:37, 30 April 2009
• Query strategy performance
  ...e the execution times. This page discusses the requirements of the various data access modules of the Phenoscape application to be demonstrated at the ASIH = Phenotype data summaries and details services =
  28 KB (4,482 words) - 16:37, 24 April 2009
• Creating Tree Files
  ...tml Mesquite]. You might begin with an existing nexus file containing the data matrix for the publication, or create a new nexus file containing a list of # Open the nexus file in Mesquite. You should see the data matrix with the taxon list in the left-hand column.
  2 KB (316 words) - 21:19, 26 November 2012
• Current queries
  This page documents the queries implemented to retrieve data for the Anatomy Web Services module of the Phenoscape project, which was de ...the client side, which is a very expensive process in terms of time. Some data structures like lookup tables for Attributes and Values have been implement
  4 KB (540 words) - 19:52, 20 January 2009
• Query execution speed-up: The investigation
  ...ractShard and the OBDSQLShard contain method definitions that can retrieve data from the repositories by executing SQL or more XML based query formats. For The Phenoscape data is stored in a database that is managed through the PostgreSQL RDBMS (Versi
  2 KB (375 words) - 15:02, 21 August 2009
• SummerTraining2009
  ...ata. Opportunities are available to work as part of the Phenoscape team on data curation or open source software/database development. Participants would
  2 KB (323 words) - 02:51, 2 February 2009
• Student Instructions
  ...sed in a shared [http://www.dropbox.com DropBox] folder (named 'Phenoscape-data'). Please contact Wasila or Paula for access. <nowiki>https://webdav.nescent.org/phenoscape-data</nowiki>
  2 KB (253 words) - 20:06, 29 November 2012
• Entities with taxonomic context
  ...effect on data curators - the interface would be the same in Phenex. The data would be modeled in this way on its way into OBD. So, there would be no ne
  4 KB (552 words) - 14:26, 30 March 2009
• Phenoscape data repository
  ...ma of this data repository and outlines the methods to load and query this data repository. == Data Repository ==
  18 KB (2,662 words) - 21:46, 14 December 2009
• ASIH09 workshop
  ...es of how these ontologies are being used to provide new ways of exploring data within morphological and phenotypic databases. Talks in the morning will be As biology has become increasingly data-rich, the reliance on databases and
  14 KB (1,979 words) - 14:02, 13 August 2009
• Phenotype Ontology Coordination Workshop
  ...ttp://www.nsf.gov/pubs/2007/nsf07565/nsf07565.htm INTEROP (Community-based Data Interoperability Networks)] application to NSF that we would submit in July * 2. What are key obstacles to data exchange and data integration?
  10 KB (1,285 words) - 02:21, 21 February 2011
• 2009 Grant Renewal Workshop
  ...e between different concepts of homology, extending the systematics legacy data transformation to all vertebrates, and laboratory case-studies for followin ...ary skeletal phenotypes associated with skeletal phenotypes and associated data from MODs.
  7 KB (857 words) - 22:19, 10 February 2012
• Phenoscape Grant Renewal Workshop/Notes
  ** MGI, Xenbase, and ZFIN all have links from their phenotype data to OMIM ...te testable hypotheses; how exactly do those queries rely on developmental data?
  16 KB (2,313 words) - 17:34, 22 May 2009
• Knowledgebase mockups
  ==Grouping data by using an ontology tree view== Possible further enhancement to page capabilities - redisplay data on a quality tree. The included results would be somewhat different.
  6 KB (946 words) - 19:58, 19 January 2010
• Conceptual schema of the Phenoscape data warehouse
  #REDIRECT [[Conceptual Model of Data Warehouse]] '''Description of the data warehouse conceptual schema '''
  108 bytes (14 words) - 13:48, 21 August 2009
• Acknowledgments
  ...tributed to Phenoscape ontology development, data curation, workshops, and data entry: ===Curators (Data Annotation)===
  16 KB (2,112 words) - 23:44, 16 December 2019
• Author Guide
  ...h with ostariophysan fishes, beginning with the papers that have published data matrices. Learn more about the project and the ontologies used by Phenoscap The morphological variation reported in systematic character data is documented in phenotype statements recorded in Entity-Quality syntax. '
  4 KB (580 words) - 21:32, 15 June 2009
• Knowledgebase mockups (Nov 2009)
  * Tree page, source data box: will need link to Pub page 3, below (case # 1337) ...ted smaller source character text under each publication to indicate which data caused association of that publication with ontological term on previous pa
  7 KB (994 words) - 18:49, 21 January 2010
• Terminology
  ...xon) Name: The taxon name used in a publication from which we have curated data. [[Category:Data]]
  4 KB (599 words) - 16:19, 4 June 2013
• Knowledgebase/Ideas for the future
  ...bservation for example). So how could users add comments on the registered data? How could they discuss, make decisions on statements? Would it be feasible
  586 bytes (90 words) - 21:21, 2 December 2009

View (previous 20 | next 20) (20 | 50 | 100 | 250 | 500)