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- Ontology Data Service API
- Ontology Request Broker
- Ontology workflow
- OpenID
- OpenURL
- Phenex
- Phenex release history
- Phenex term filter
- Phenoscape 1 Curated Publications
- Phenoscape Grant Renewal Workshop/Notes
- Phenoscape KB
- Phenoscape data loader
- Phenoscape data policy
- Phenoscape data repository
- Phenoscape use cases
- Phenoscape web UI
- Phenoscape web UI planning
- Phenote
- Phenote:Phylogeny Chooser
- Phenote:Specimen List
- Phenote User Guide
- Phenotype Ontology Coordination Workshop
- Postdoc2016
- Problem Log Format
- Project Plan
- Publications and Posters
- Queries
- Queries and Query Execution Plans
- Queries for Phenoscape UI demo'ed at SICB, Boston in Jan 2009
- Queries to be implemented in the future
- Query execution speed-up: The investigation
- Query strategy performance
- Reasoning over homology statements
- Relating taxa to phenotypes
- Resources for Data Contributors
- Roadmap for first iteration
- Semantics of phenotype annotations
- ShibAuth
- SingleEntity TreeView
- Skeletal Anatomy Jamboree
- Software
- Software roadmap
- Storing publication reference information
- Student Instructions
- SummerTraining2009
- Synchronization Tool
- TTOUpdate tool
- TTO Changes
- Taxonomic Rank Ontology
- Taxonomic Rank Vocabulary